Scholarly Publications
Salehi, A, Yanai A, Richter A, Li C, Sutherland D, Coombe L, Kotkoff M, Warren RL, Hoang LMN, and Birol I (2025). Antimicrobial Peptides with High Bioactivity Against MDR Isolates: Addressing Public Health Concerns. Microb Pathog 107:1-8
NIH: https://pubmed.ncbi.nlm.nih.gov/40695040/
DOI: https://doi.org/10.1016/j.micpath.2025.107893
Li C, Sutherland D, Salehi A, Richter A, Lin D, Aninta SI, Ebrahimikondori H, Yanai A, Coombe L, Warren RL, Kotkoff M, Hoang LMN, Helbing CC, and Birol I (2025). Mining the UniProtKB/Swiss-Prot database for antimicrobial peptides. Protein Sci 34:1-16
NIH: https://pmc.ncbi.nlm.nih.gov/articles/PMC11917140/
DOI: https://doi.org/10.1002/pro.70083
Li C, Sutherland D, Richter A, Coombe L, Yanai A, Warren RL, Kotkoff M, Hof F, Hoang LMN, Helbing CC, and Birol I (2024). De novo synthetic antimicrobial peptide design with a recurrent neural network. Protein Sci 33(8):1-16
NIH: https://pubmed.ncbi.nlm.nih.gov/38988311/
DOI: https://doi.org/10.1002/pro.5088
Ebrahimikondori H, Sutherland D, Yanai A, Richter A, Salehi A, Li C, Coombe L, Kotkoff M, Warren RL, and Birol I (2024). Structure-aware deep learning model for peptide toxicity prediction. Protein Sci 33(7):1-15